Detailed information of matrix profile PH0174.1

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Profile summary
Name: Vax1
Matrix ID: PH0174.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q2NKI2  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 50 19 22 16 1 89 96 2 1 87 35 12 19 23 65 20 ]
C [ 24 34 13 15 12 10 1 0 0 0 25 53 37 40 8 10 ]
G [ 18 33 53 15 0 0 0 1 10 12 34 13 9 12 13 51 ]
T [ 8 13 12 54 87 1 2 96 89 1 6 22 35 26 15 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0174.1 PH0174 1 Vax1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

Included Models:

GC Content: