Detailed information of matrix profile PH0174.1

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Profile summary
Name: Vax1
Matrix ID: PH0174.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q2NKI2  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 15 26 35 22 6 1 89 96 2 1 87 54 12 13 8 ]
C [ 51 13 12 9 13 34 12 10 1 0 0 0 15 53 33 18 ]
G [ 10 8 40 37 53 25 0 0 0 1 10 12 15 13 34 24 ]
T [ 20 65 23 19 12 35 87 1 2 96 89 1 16 22 19 50 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0174.1 PH0174 1 Vax1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: