Detailed information of matrix profile PH0168.1

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Profile summary
Name: Hnf1b
Matrix ID: PH0168.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P27889  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 16 14 17 6 6 1 96 98 1 1 90 28 16 22 5 15 ]
C [ 14 18 40 19 5 3 1 0 1 95 15 1 13 36 34 32 16 ]
G [ 26 37 14 29 84 2 0 0 0 1 2 3 56 21 12 38 15 ]
T [ 28 29 32 34 5 89 98 3 1 3 82 6 3 26 32 25 53 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0168.1 PH0168 1 Hnf1b Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Included Models:

GC Content: