Detailed information of matrix profile PH0168.1

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Profile summary
Name: Hnf1b
Matrix ID: PH0168.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P27889  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 53 25 32 26 3 6 82 3 1 3 98 89 5 34 32 29 28 ]
C [ 15 38 12 21 56 3 2 1 0 0 0 2 84 29 14 37 26 ]
G [ 16 32 34 36 13 1 15 95 1 0 1 3 5 19 40 18 14 ]
T [ 15 5 22 16 28 90 1 1 98 96 1 6 6 17 14 16 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0168.1 PH0168 1 Hnf1b Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: