Detailed information of matrix profile PH0162.1

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Profile summary
Name: Six2
Matrix ID: PH0162.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q62232  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 45 59 19 30 12 1 13 0 96 0 1 90 17 25 34 23 17 ]
C [ 10 12 4 11 4 3 0 0 0 0 98 2 51 17 8 27 8 ]
G [ 29 9 26 52 80 92 87 5 4 0 0 5 8 29 6 22 22 ]
T [ 16 21 51 7 4 4 0 95 0 99 1 2 25 29 52 28 52 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0162.1 PH0162 1 Six2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: