Detailed information of matrix profile PH0162.1

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Profile summary
Name: Six2
Matrix ID: PH0162.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q62232  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 52 28 52 29 25 2 1 99 0 95 0 4 4 7 51 21 16 ]
C [ 22 22 6 29 8 5 0 0 4 5 87 92 80 52 26 9 29 ]
G [ 8 27 8 17 51 2 98 0 0 0 0 3 4 11 4 12 10 ]
T [ 17 23 34 25 17 90 1 0 96 0 13 1 12 30 19 59 45 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0162.1 PH0162 1 Six2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: