Detailed information of matrix profile PH0161.1

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Profile summary
Name: Six1
Matrix ID: PH0161.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q62231  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 32 48 21 39 22 4 20 0 96 0 1 91 18 23 33 16 18 ]
C [ 13 21 9 14 5 5 1 0 0 0 97 2 27 16 16 27 7 ]
G [ 40 9 21 40 69 87 79 5 3 0 0 4 12 30 12 28 23 ]
T [ 15 22 49 7 5 4 0 94 0 99 1 3 43 31 39 29 53 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0161.1 PH0161 1 Six1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: