Detailed information of matrix profile PH0161.1

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Profile summary
Name: Six1
Matrix ID: PH0161.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q62231  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 53 29 39 31 43 3 1 99 0 94 0 4 5 7 49 22 15 ]
C [ 23 28 12 30 12 4 0 0 3 5 79 87 69 40 21 9 40 ]
G [ 7 27 16 16 27 2 97 0 0 0 1 5 5 14 9 21 13 ]
T [ 18 16 33 23 18 91 1 0 96 0 20 4 22 39 21 48 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0161.1 PH0161 1 Six1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: