Detailed information of matrix profile PH0135.1

  1. Home
  2. Matrix > PH0135.1

Profile summary
Name: Phox2a
Matrix ID: PH0135.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q62066  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 17 30 21 30 68 3 0 97 99 1 0 88 29 5 33 26 ]
C [ 32 22 24 38 12 35 11 1 0 0 0 1 4 25 18 28 ]
G [ 23 28 30 8 15 2 0 1 1 0 2 10 60 21 33 39 ]
T [ 28 21 25 23 5 60 88 1 0 99 97 1 8 49 16 8 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0135.1 PH0135 1 Phox2a Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: