Detailed information of matrix profile PH0135.1

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Profile summary
Name: Phox2a
Matrix ID: PH0135.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q62066  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 8 16 49 8 1 97 99 0 1 88 60 5 23 25 21 28 ]
C [ 39 33 21 60 10 2 0 1 1 0 2 15 8 30 28 23 ]
G [ 28 18 25 4 1 0 0 0 1 11 35 12 38 24 22 32 ]
T [ 26 33 5 29 88 0 1 99 97 0 3 68 30 21 30 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0135.1 PH0135 1 Phox2a Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: