Detailed information of matrix profile PH0125.1

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Profile summary
Name: Obox5_2
Matrix ID: PH0125.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q7TPZ5  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 17 50 17 78 44 20 2 99 99 1 1 0 4 8 17 20 19 ]
C [ 22 9 25 3 7 2 0 0 0 0 98 87 66 22 35 33 23 ]
G [ 34 14 18 10 19 1 0 0 0 1 0 1 9 11 21 3 20 ]
T [ 28 27 40 8 31 77 97 1 0 98 0 12 20 59 27 43 39 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0125.1 PH0125 1 Obox5_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

Included Models:

GC Content: