Detailed information of matrix profile PH0125.1

  1. Home
  2. Matrix > PH0125.1

Profile summary
Name: Obox5_2
Matrix ID: PH0125.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q7TPZ5  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 39 43 27 59 20 12 0 98 0 1 97 77 31 8 40 27 28 ]
C [ 20 3 21 11 9 1 0 1 0 0 0 1 19 10 18 14 34 ]
G [ 23 33 35 22 66 87 98 0 0 0 0 2 7 3 25 9 22 ]
T [ 19 20 17 8 4 0 1 1 99 99 2 20 44 78 17 50 17 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0125.1 PH0125 1 Obox5_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: