Detailed information of matrix profile PH0120.1

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Profile summary
Name: Nkx6-3
Matrix ID: PH0120.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9D2W8  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 21 38 31 46 68 18 1 99 98 2 1 84 30 9 14 19 8 ]
C [ 17 23 21 10 3 2 7 0 0 0 2 0 35 19 22 26 22 ]
G [ 43 22 17 10 2 3 0 1 1 0 25 12 23 16 31 23 45 ]
T [ 19 16 31 34 28 78 92 1 1 97 72 3 12 56 33 31 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0120.1 PH0120 1 Nkx6-3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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