Detailed information of matrix profile PH0120.1

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Profile summary
Name: Nkx6-3
Matrix ID: PH0120.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9D2W8  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 25 31 33 56 12 3 72 97 1 1 92 78 28 34 31 16 19 ]
C [ 45 23 31 16 23 12 25 0 1 1 0 3 2 10 17 22 43 ]
G [ 22 26 22 19 35 0 2 0 0 0 7 2 3 10 21 23 17 ]
T [ 8 19 14 9 30 84 1 2 98 99 1 18 68 46 31 38 21 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0120.1 PH0120 1 Nkx6-3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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