Detailed information of matrix profile PH0119.1

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Profile summary
Name: Nkx6-1_2
Matrix ID: PH0119.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q99MA9  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 37 26 9 56 84 18 0 98 98 2 1 79 9 15 8 12 ]
C [ 23 24 21 8 2 1 7 0 0 0 2 0 43 24 34 57 ]
G [ 25 39 6 7 2 4 0 1 0 0 26 17 22 28 6 13 ]
T [ 14 11 64 29 11 77 93 1 1 98 71 4 26 34 51 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0119.1 PH0119 1 Nkx6-1_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Included Models:

GC Content: