Detailed information of matrix profile PH0119.1

  1. Home
  2. Matrix > PH0119.1

Profile summary
Name: Nkx6-1_2
Matrix ID: PH0119.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q99MA9  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 18 51 34 26 4 71 98 1 1 93 77 11 29 64 11 14 ]
C [ 13 6 28 22 17 26 0 0 1 0 4 2 7 6 39 25 ]
G [ 57 34 24 43 0 2 0 0 0 7 1 2 8 21 24 23 ]
T [ 12 8 15 9 79 1 2 98 98 0 18 84 56 9 26 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0119.1 PH0119 1 Nkx6-1_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: