Detailed information of matrix profile PH0118.1

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Profile summary
Name: Nkx6-1_1
Matrix ID: PH0118.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q99MA9  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 23 34 35 56 77 18 0 99 98 2 1 88 32 12 14 14 6 ]
C [ 14 31 16 8 2 1 4 0 0 0 1 0 45 30 26 31 24 ]
G [ 47 21 15 11 2 2 0 0 0 0 17 9 10 11 21 25 51 ]
T [ 16 15 34 25 19 78 95 1 1 98 81 3 13 47 39 30 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0118.1 PH0118 1 Nkx6-1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: