Detailed information of matrix profile PH0118.1

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Profile summary
Name: Nkx6-1_1
Matrix ID: PH0118.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q99MA9  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 19 30 39 47 13 3 81 98 1 1 95 78 19 25 34 15 16 ]
C [ 51 25 21 11 10 9 17 0 0 0 0 2 2 11 15 21 47 ]
G [ 24 31 26 30 45 0 1 0 0 0 4 1 2 8 16 31 14 ]
T [ 6 14 14 12 32 88 1 2 98 99 0 18 77 56 35 34 23 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0118.1 PH0118 1 Nkx6-1_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: