Detailed information of matrix profile PH0115.1

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Profile summary
Name: Nkx2-6
Matrix ID: PH0115.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P43688  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 22 40 79 21 2 0 97 2 0 0 67 76 34 44 13 9 ]
C [ 20 16 2 15 85 94 0 98 0 6 1 1 36 20 21 23 ]
G [ 22 27 13 35 13 0 0 0 0 0 31 3 28 11 4 3 ]
T [ 36 18 6 29 0 6 3 0 99 94 1 20 3 25 62 65 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0115.1 PH0115 1 Nkx2-6 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: