Detailed information of matrix profile PH0115.1

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Profile summary
Name: Nkx2-6
Matrix ID: PH0115.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P43688  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 65 62 25 3 20 1 94 99 0 3 6 0 29 6 18 36 ]
C [ 3 4 11 28 3 31 0 0 0 0 0 13 35 13 27 22 ]
G [ 23 21 20 36 1 1 6 0 98 0 94 85 15 2 16 20 ]
T [ 9 13 44 34 76 67 0 0 2 97 0 2 21 79 40 22 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0115.1 PH0115 1 Nkx2-6 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: