Detailed information of matrix profile PH0111.1

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Profile summary
Name: Nkx2-2
Matrix ID: PH0111.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P42586  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 30 27 48 43 12 0 92 2 1 0 13 93 50 67 36 13 29 ]
C [ 26 14 21 7 70 88 1 97 0 20 10 0 11 7 10 19 16 ]
G [ 14 15 23 33 17 0 0 0 0 0 75 1 36 11 23 20 23 ]
T [ 30 44 7 16 0 12 7 0 99 80 1 6 3 15 32 48 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0111.1 PH0111 1 Nkx2-2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: