Detailed information of matrix profile PH0111.1

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Profile summary
Name: Nkx2-2
Matrix ID: PH0111.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P42586  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 32 48 32 15 3 6 1 80 99 0 7 12 0 16 7 44 30 ]
C [ 23 20 23 11 36 1 75 0 0 0 0 0 17 33 23 15 14 ]
G [ 16 19 10 7 11 0 10 20 0 97 1 88 70 7 21 14 26 ]
T [ 29 13 36 67 50 93 13 0 1 2 92 0 12 43 48 27 30 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0111.1 PH0111 1 Nkx2-2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: