Detailed information of matrix profile PH0108.1

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Profile summary
Name: Msx3
Matrix ID: PH0108.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P70354  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 32 60 40 75 77 4 0 99 99 1 1 99 70 18 22 31 ]
C [ 35 13 29 5 9 67 52 0 1 0 1 0 3 18 22 21 ]
G [ 23 16 10 13 9 19 0 1 0 0 0 1 15 30 18 10 ]
T [ 10 10 21 6 5 10 47 0 0 99 98 1 12 33 37 38 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0108.1 PH0108 1 Msx3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: