Detailed information of matrix profile PH0108.1

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Profile summary
Name: Msx3
Matrix ID: PH0108.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P70354  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 38 37 33 12 1 98 99 0 0 47 10 5 6 21 10 10 ]
C [ 10 18 30 15 1 0 0 0 1 0 19 9 13 10 16 23 ]
G [ 21 22 18 3 0 1 0 1 0 52 67 9 5 29 13 35 ]
T [ 31 22 18 70 99 1 1 99 99 0 4 77 75 40 60 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0108.1 PH0108 1 Msx3 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: