Detailed information of matrix profile PB0144.1

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Profile summary
Name: Lef1_2
Matrix ID: PB0144.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P27782  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 23 44 42 17 81 4 2 94 93 3 11 68 24 9 33 34 ]
C [ 27 8 14 34 2 1 90 1 1 2 71 2 35 24 18 16 ]
G [ 39 23 32 39 1 1 4 1 4 5 1 28 19 20 11 19 ]
T [ 11 25 12 10 16 94 4 4 2 91 17 3 23 46 38 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0144.1 PB0144 1 Lef1_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: