Detailed information of matrix profile PB0144.1

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Profile summary
Name: Lef1_2
Matrix ID: PB0144.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P27782  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 32 38 46 23 3 17 91 2 4 4 94 16 10 12 25 11 ]
C [ 19 11 20 19 28 1 5 4 1 4 1 1 39 32 23 39 ]
G [ 16 18 24 35 2 71 2 1 1 90 1 2 34 14 8 27 ]
T [ 34 33 9 24 68 11 3 93 94 2 4 81 17 42 44 23 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0144.1 PB0144 1 Lef1_2 Mus musculus
High Mobility Group box (HMG) Other Alpha-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: