Detailed information of matrix profile PB0135.1

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Profile summary
Name: Hoxa3_2
Matrix ID: PB0135.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P02831  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 57 51 55 59 32 15 2 86 5 9 86 48 15 26 ]
C [ 14 21 5 15 18 75 34 7 2 8 2 5 28 14 ]
G [ 16 7 27 6 19 10 32 4 2 1 2 32 42 48 ]
T [ 13 20 13 20 31 1 33 3 92 82 9 14 15 11 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0135.1 PB0135 1 Hoxa3_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: