Detailed information of matrix profile PB0135.1

  1. Home
  2. Matrix > PB0135.1

Profile summary
Name: Hoxa3_2
Matrix ID: PB0135.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P02831  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 11 15 14 9 82 92 3 33 1 31 20 13 20 13 ]
C [ 48 42 32 2 1 2 4 32 10 19 6 27 7 16 ]
G [ 14 28 5 2 8 2 7 34 75 18 15 5 21 14 ]
T [ 26 15 48 86 9 5 86 2 15 32 59 55 51 57 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0135.1 PB0135 1 Hoxa3_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: