JASPAR Collection PBM

Total 208 profiles

Display profiles
ID Name Species Class Family Sequence logo
PB0011.1 Ehf_1 Mus musculus Winged Helix-Turn-Helix Ets
PB0012.1 Elf3_1 Mus musculus Winged Helix-Turn-Helix Ets
PB0013.1 Eomes_1 Mus musculus Beta-Hairpin-Ribbon T
PB0014.1 Esrra_1 Mus musculus Zinc-coordinating Hormone-nuclear Receptor
PB0015.1 Foxa2_1 Mus musculus Winged Helix-Turn-Helix Forkhead
PB0016.1 Foxj1_1 Mus musculus Winged Helix-Turn-Helix Forkhead
PB0017.1 Foxj3_1 Mus musculus Winged Helix-Turn-Helix Forkhead
PB0018.1 Foxk1_1 Mus musculus Winged Helix-Turn-Helix Forkhead
PB0019.1 Foxl1_1 Mus musculus Winged Helix-Turn-Helix Forkhead
PB0020.1 Gabpa_1 Mus musculus Winged Helix-Turn-Helix Ets
Showing 10 profiles of page 2 from 21 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.