Detailed information of matrix profile PB0014.1

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Profile summary
Name: Esrra_1
Matrix ID: PB0014.1
Class: Zinc-coordinating
Family: Hormone-nuclear Receptor
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: O08580  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 21 42 20 12 7 97 98 1 1 4 0 80 25 27 20 19 31 ]
C [ 18 28 20 28 78 0 0 0 0 0 91 0 24 24 29 19 26 ]
G [ 29 14 26 14 14 2 2 94 98 4 2 20 4 30 23 35 18 ]
T [ 32 15 35 46 1 1 0 5 1 92 7 0 48 19 28 27 24 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0014.1 PB0014 1 Esrra_1 Mus musculus
Hormone-nuclear Receptor Zinc-coordinating
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: