Detailed information of matrix profile PB0020.1

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Profile summary
Name: Gabpa_1
Matrix ID: PB0020.1
Class: Winged Helix-Turn-Helix
Family: Ets
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q00422  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 35 29 44 29 78 2 4 0 0 99 90 22 2 20 25 32 28 ]
C [ 36 29 20 16 3 94 95 0 0 0 0 2 13 18 26 20 25 ]
G [ 12 24 12 15 14 4 1 99 99 0 0 75 1 36 20 20 25 ]
T [ 17 18 24 40 5 0 0 0 0 1 10 0 83 26 29 28 22 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PB0020.1 PB0020 1 Gabpa_1 Mus musculus
Ets Winged Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: