JASPAR Collection CNE

Total 233 profiles

Display profiles
ID Name Consensus Species Sequence logo
CN0021.1 LM21 ATTTGCATNTCATTTGCATW Homo sapiens
CN0022.1 LM22 CAGCTGTTWAACAGCTG Homo sapiens
CN0023.1 LM23 TKACCACCAGGTGGYGCTRW Homo sapiens
CN0024.1 LM24 DGARAACAGATGGCW Homo sapiens
CN0025.1 LM25 AAARGMAATTKCYTTT Homo sapiens
CN0026.1 LM26 WAAACACAGCTGT Homo sapiens
CN0027.1 LM27 ATTTGCATSTCATTWGCA Homo sapiens
CN0028.1 LM28 AGAACATCTGTTTCY Homo sapiens
CN0029.1 LM29 WGCTAATTGCAAATG Homo sapiens
CN0030.1 LM30 CTTTGAAATGTCAAW Homo sapiens
Showing 10 profiles of page 3 from 24 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.