Detailed information of matrix profile PL0008.1

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Profile summary
Name: hlh-29
Matrix ID: PL0008.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q19917  
Source:
Comment: homodimer

Sequence logo

Frequency matrix

         
A [ 22 28 33 26 5 82 2 3 0 46 1 3 2 5 30 30 41 ]
C [ 29 15 10 31 54 0 92 0 85 0 1 1 1 47 32 23 10 ]
G [ 23 18 38 10 13 15 0 95 0 52 0 93 49 4 11 17 23 ]
T [ 24 36 17 31 27 1 4 0 13 0 97 1 46 41 26 28 23 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PL0008.1 PL0008 1 hlh-29 Caenorhabditis elegans
Helix-Loop-Helix Zipper-type
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: