Detailed information of matrix profile PH0171.1

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Profile summary
Name: Nkx2-1
Matrix ID: PH0171.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P50220  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 63 62 27 3 10 2 83 99 0 8 12 1 19 10 13 39 ]
C [ 5 5 7 18 1 67 0 0 0 0 0 9 47 18 23 15 ]
G [ 15 12 32 33 0 12 16 0 98 2 88 83 20 4 23 32 ]
T [ 17 21 34 45 88 19 1 0 2 90 0 7 14 68 40 14 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0171.1 PH0171 1 Nkx2-1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: