Detailed information of matrix profile PH0171.1

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Profile summary
Name: Nkx2-1
Matrix ID: PH0171.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P50220  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 14 40 68 14 7 0 90 2 0 1 19 88 45 34 21 17 ]
C [ 32 23 4 20 83 88 2 98 0 16 12 0 33 32 12 15 ]
G [ 15 23 18 47 9 0 0 0 0 0 67 1 18 7 5 5 ]
T [ 39 13 10 19 1 12 8 0 99 83 2 10 3 27 62 63 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0171.1 PH0171 1 Nkx2-1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: