Detailed information of matrix profile PH0169.1

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Profile summary
Name: Tgif1
Matrix ID: PH0169.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID:
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 34 31 15 13 70 4 1 0 0 4 0 99 48 33 40 16 28 ]
C [ 20 40 27 41 13 20 97 2 0 0 99 0 11 5 28 17 28 ]
G [ 14 21 35 26 10 73 0 0 99 0 0 0 7 5 21 12 16 ]
T [ 32 9 22 20 6 4 2 98 0 96 0 1 34 56 11 55 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0169.1 PH0169 1 Tgif1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: