Detailed information of matrix profile PH0169.1

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Profile summary
Name: Tgif1
Matrix ID: PH0169.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID:
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 27 55 11 56 34 1 0 96 0 98 2 4 6 20 22 9 32 ]
C [ 16 12 21 5 7 0 0 0 99 0 0 73 10 26 35 21 14 ]
G [ 28 17 28 5 11 0 99 0 0 2 97 20 13 41 27 40 20 ]
T [ 28 16 40 33 48 99 0 4 0 0 1 4 70 13 15 31 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0169.1 PH0169 1 Tgif1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: