Detailed information of matrix profile PH0167.1

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Profile summary
Name: Tcf1
Matrix ID: PH0167.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q66JY7  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 36 17 22 9 19 67 2 2 2 97 80 9 13 35 42 15 34 ]
C [ 29 23 17 11 23 3 6 1 0 0 1 74 36 21 35 26 14 ]
G [ 24 16 16 14 4 24 90 0 0 1 11 10 15 24 19 49 35 ]
T [ 11 44 45 67 54 5 2 97 97 2 9 8 36 20 4 10 16 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0167.1 PH0167 1 Tcf1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: