Detailed information of matrix profile PH0167.1

  1. Home
  2. Matrix > PH0167.1

Profile summary
Name: Tcf1
Matrix ID: PH0167.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q66JY7  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 16 10 4 20 36 8 9 2 97 97 2 5 54 67 45 44 11 ]
C [ 35 49 19 24 15 10 11 1 0 0 90 24 4 14 16 16 24 ]
G [ 14 26 35 21 36 74 1 0 0 1 6 3 23 11 17 23 29 ]
T [ 34 15 42 35 13 9 80 97 2 2 2 67 19 9 22 17 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0167.1 PH0167 1 Tcf1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: