Detailed information of matrix profile PH0166.1

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Profile summary
Name: Six6_2
Matrix ID: PH0166.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9QZ28  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 53 41 37 34 35 4 2 99 1 97 0 4 5 10 43 32 20 ]
C [ 22 11 8 21 10 1 1 0 2 3 78 89 73 30 18 16 35 ]
G [ 16 27 13 24 14 2 96 0 0 0 2 2 4 14 11 11 10 ]
T [ 9 21 41 22 41 93 2 0 97 1 20 4 19 46 28 42 36 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0166.1 PH0166 1 Six6_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Included Models:

GC Content: