Detailed information of matrix profile PH0166.1

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Profile summary
Name: Six6_2
Matrix ID: PH0166.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9QZ28  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 36 42 28 46 19 4 20 1 97 0 2 93 41 22 41 21 9 ]
C [ 10 11 11 14 4 2 2 0 0 0 96 2 14 24 13 27 16 ]
G [ 35 16 18 30 73 89 78 3 2 0 1 1 10 21 8 11 22 ]
T [ 20 32 43 10 5 4 0 97 1 99 2 4 35 34 37 41 53 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0166.1 PH0166 1 Six6_2 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

Included Models:

GC Content: