Detailed information of matrix profile PH0165.1

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Profile summary
Name: Six6_1
Matrix ID: PH0165.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9QZ28  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 60 27 48 31 26 3 1 99 0 95 0 3 2 7 64 22 27 ]
C [ 19 18 9 22 6 2 0 0 3 5 85 91 81 32 13 7 28 ]
G [ 11 20 13 21 31 1 98 0 0 0 1 3 4 17 5 10 12 ]
T [ 9 35 29 27 37 95 1 0 97 0 14 2 13 43 18 61 33 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0165.1 PH0165 1 Six6_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: