Detailed information of matrix profile PH0165.1

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Profile summary
Name: Six6_1
Matrix ID: PH0165.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9QZ28  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 33 61 18 43 13 2 14 0 97 0 1 95 37 27 29 35 9 ]
C [ 12 10 5 17 4 3 1 0 0 0 98 1 31 21 13 20 11 ]
G [ 28 7 13 32 81 91 85 5 3 0 0 2 6 22 9 18 19 ]
T [ 27 22 64 7 2 3 0 95 0 99 1 3 26 31 48 27 60 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0165.1 PH0165 1 Six6_1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: