Detailed information of matrix profile PH0164.1

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Profile summary
Name: Six4
Matrix ID: PH0164.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q61321  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 8 28 34 26 35 2 0 0 17 0 2 94 17 23 16 39 17 ]
C [ 30 25 25 10 21 1 0 0 1 0 96 2 10 13 31 25 14 ]
G [ 21 30 29 30 23 97 99 3 81 1 0 3 12 29 12 18 17 ]
T [ 41 17 13 34 21 0 1 97 1 99 1 2 61 35 41 19 52 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0164.1 PH0164 1 Six4 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: