Detailed information of matrix profile PH0164.1

  1. Home
  2. Matrix > PH0164.1

Profile summary
Name: Six4
Matrix ID: PH0164.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q61321  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 52 19 41 35 61 2 1 99 1 97 1 0 21 34 13 17 41 ]
C [ 17 18 12 29 12 3 0 1 81 3 99 97 23 30 29 30 21 ]
G [ 14 25 31 13 10 2 96 0 1 0 0 1 21 10 25 25 30 ]
T [ 17 39 16 23 17 94 2 0 17 0 0 2 35 26 34 28 8 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0164.1 PH0164 1 Six4 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: