Detailed information of matrix profile PH0154.1

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Profile summary
Name: Prrx1
Matrix ID: PH0154.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P63013  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 25 14 55 64 3 1 98 99 0 0 95 49 3 9 40 20 5 ]
C [ 27 15 22 10 63 8 1 0 1 1 0 5 48 6 17 39 18 ]
G [ 31 27 10 20 3 0 1 1 0 0 4 43 16 11 25 25 17 ]
T [ 16 44 13 6 30 90 0 0 99 98 2 3 33 74 19 16 60 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0154.1 PH0154 1 Prrx1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: