Detailed information of matrix profile PH0154.1

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Profile summary
Name: Prrx1
Matrix ID: PH0154.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P63013  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 60 16 19 74 33 3 2 98 99 0 0 90 30 6 13 44 16 ]
C [ 17 25 25 11 16 43 4 0 0 1 1 0 3 20 10 27 31 ]
G [ 18 39 17 6 48 5 0 1 1 0 1 8 63 10 22 15 27 ]
T [ 5 20 40 9 3 49 95 0 0 99 98 1 3 64 55 14 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0154.1 PH0154 1 Prrx1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: