Detailed information of matrix profile PH0143.1

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Profile summary
Name: Pou2f1
Matrix ID: PH0143.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P25425  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 31 17 31 30 45 32 4 89 98 1 2 93 49 11 21 51 ]
C [ 14 21 12 24 10 24 1 9 0 0 2 1 5 17 18 5 ]
G [ 28 13 31 9 31 2 0 1 0 0 10 0 32 44 7 12 ]
T [ 27 50 26 37 14 42 95 1 2 98 86 6 15 29 54 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0143.1 PH0143 1 Pou2f1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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Consensus:

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GC Content: