Detailed information of matrix profile PH0142.1

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Profile summary
Name: Pou1f1
Matrix ID: PH0142.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q00286  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 18 44 24 25 10 80 89 6 3 93 92 5 8 65 34 12 24 ]
C [ 18 20 33 21 2 10 4 1 2 2 1 2 2 21 20 26 33 ]
G [ 48 14 19 11 9 2 2 1 2 2 1 4 10 5 19 24 14 ]
T [ 15 22 24 43 79 8 5 92 93 3 6 89 80 9 27 39 30 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0142.1 PH0142 1 Pou1f1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: