Detailed information of matrix profile PH0142.1

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Profile summary
Name: Pou1f1
Matrix ID: PH0142.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q00286  
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

         
A [ 30 39 27 9 80 89 6 3 93 92 5 8 79 43 24 22 15 ]
C [ 14 24 19 5 10 4 1 2 2 1 2 2 9 11 19 14 48 ]
G [ 33 26 20 21 2 2 1 2 2 1 4 10 2 21 33 20 18 ]
T [ 24 12 34 65 8 5 92 93 3 6 89 80 10 25 24 44 18 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
PH0142.1 PH0142 1 Pou1f1 Mus musculus
Homeo Helix-Turn-Helix
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: